Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq306 581 1e-163 >seq306 Length=6939 Score = 581 bits (644), Expect = 1e-163 Identities = 457/544 (84%), Gaps = 11/544 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 3843 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 3784 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 3783 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 3724 Query 127 GGCCCGCGAAGGA----CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCA 182 || || | |||||| | | ||| | | || | || | | | Sbjct 3723 AGCAATAAAAAAAATTACCTTAAATCAA-AAACTCTTTTAATAAAAAAAGAGGCTCAATA 3665 Query 183 TT---GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239 | || ||||||||| || ||| |||||||||||||| |||| | |||| Sbjct 3664 TAACGGAATAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCATA---GCTC 3608 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 3607 CCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAACAG 3548 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 3547 GGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATA 3488 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3487 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 3428 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3427 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTG 3368 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTT 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 3367 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTT 3308 Query 540 TCTG 543 |||| Sbjct 3307 TCTG 3304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194947232