Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20sp._20chipmunk_20LX- 2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq501 358 1e-96 >seq501 Length=11692 Score = 358 bits (396), Expect = 1e-96 Identities = 237/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 4584 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 4643 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 4644 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 4703 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4704 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 4763 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 4764 CTGTGGTAACTTTTCTGACACCTCTAGCTGTAATTTTCACAGATCTAAAGGATCGATAGG 4823 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 4824 CCATGCTTTCACAGTTTGTATTC 4846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392711968