Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq290 95.1 1e-14
>seq290
Length=478353
Score = 95.1 bits (104), Expect = 1e-14
Identities = 362/562 (64%), Gaps = 5/562 (1%)
Strand=Plus/Plus
Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072
|||||| || || || || || || || || | || || || | ||||| |||||
Sbjct 253963 AGATGCCAGATTACAAACTGCAATTTCATCTCCACTAGTGTATTCCATTATTTCTGTGCA 254022
Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT-GCATGCAT 66131
| ||||| || || || |||||||||| ||| ||||| || | ||| ||| ||||
Sbjct 254023 TAAGTTACTTGAGACAATAGTTCCCAAATTCTTTTGGTTACTTTTCCTATTTGCA-GCAT 254081
Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACT-CAATGATGGCGTGCCAA 66190
|||| || || | || || || || |||| ||| | || |||| || ||||
Sbjct 254082 CCTTATAACAAATAAATGGCGTTCCCGTTTCAATTTGAGCCTGCAAT-ATTAAAAACCAA 254140
Query 66191 AGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250
|| | || |||| || | | | | |||| |||||| | |||||| |
Sbjct 254141 AGTTTTTGCGCTTTCATGGTCTTTCTCCCACGCCCTTGTTTTTCGTATTCTTCGTACAAT 254200
Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310
| || |||||||| || || || | | |||| || || |||||||
Sbjct 254201 TTCCTAAACTCATCACCCCAAACATCCTGCAATCCTCTGCACTCGTCCGGGCACATCAAG 254260
Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370
| |||||| ||||| ||| || | ||||||||||||||| | ||| |||||
Sbjct 254261 GTCCAATCTTGATCCTTTTCAACCCTCTCCATAAATAGATCAGGAACCCAAAGGGCAGGA 254320
Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430
||||| || || || ||| || | ||||| ||||| | | || | |||||
Sbjct 254321 AAGAGGTCACGACATCTCATCTCTTCCTTTCCGTGGTTTTTTCTAATTTCAATAAACTCT 254380
Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490
| | ||| |||||||||||||| || || || | | || ||||||| || ||
Sbjct 254381 ACAACGTCCAAATGCCATGGTTCCAAATAAATTGCAATAGCACCTTTACGTTTCCCACCG 254440
Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550
||||| || | || | ||| || || | || |||| ||| || | || || |||
Sbjct 254441 CCTTGATCAATATACCTAGCAGTATCATTATAAACGCGCAGCATTGGAATTAGTCCATTA 254500
Query 66551 GATTTGCCATTGGTGCCGTCGA 66572
|| || |||||||| || ||||
Sbjct 254501 GACTTCCCATTGGTTCC-TCGA 254521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397563866907920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |