Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21 208 1e-51 >seq21 Length=6330 Score = 208 bits (230), Expect = 1e-51 Identities = 197/247 (80%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATG 131 ||||||||||| |||||||||||| | ||||||||| || || | |||||| |||||| Sbjct 709 TTTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCATTAGCCTTGAATACTCCAGCATG 768 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||| || || | ||| |||| |||||| ||| || |||||||| Sbjct 769 GAATAATATAAAAGATTTTTA---TCTTTTTTATTGGTT-CTAAGATAAAAATAATGATT 824 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 825 AATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTT 884 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||| ||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 885 AAAGACAAACTAGTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 943 Query 312 TTAGGGG 318 ||||||| Sbjct 944 TTAGGGG 950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199643072