Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20ubiquitum_20[genbank_20GCA_5F001865345.1_202016- 11-03] 39 sequences; 8,970,213 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq21 518 1e-144 >seq21 Length=6330 Score = 518 bits (574), Expect = 1e-144 Identities = 420/505 (83%), Gaps = 20/505 (4%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||| || | || ||||||| ||||| |||||||||||||| Sbjct 501 ACTCATTCCAATTACAAAACTATTTAAAGTCCTGTATTGTTATTTCTTGTCACTACCTCC 442 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || | |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 441 CTGTATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 382 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct 381 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCATTGCCACGGTAGG 322 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 ||| || |||||| || |||| ||||||| |||||| |||||||| || | | || Sbjct 321 CCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGA--TAT----GTCACA 268 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTT 302 ||| ||| ||| ||||||||||||||||||| || |||||| Sbjct 267 TATAAATGTGATCCGTAAAGTTATTATGAATCACCA----------AATTAAATTGGTTC 218 Query 303 TTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||| |||||||| |||| || ||| ||||||||||||||||| Sbjct 217 TTTATCTAATAAATACAACCCTTCCGTAAAGTTAGGTCTTTCCGCATGTATTAGCTCTAG 158 Query 361 AATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||| ||||| | |||||| ||||| ||||||| | ||||| Sbjct 157 AATTACCACGGTTATCCATGTAAGTAAAAGATTATCAAGTAAACTATAACTGTTATAATG 98 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| || ||||| | |||||||||||||||||||||||||||||||| Sbjct 97 AGCCATTCGCAGTTTAACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATCTTT 39 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 38 GAGACAAGCATATGACTACTGGCAG 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399410944