Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1944 266 6e-69 >seq1944 Length=1893 Score = 266 bits (294), Expect = 6e-69 Identities = 231/280 (83%), Gaps = 5/280 (2%) Strand=Plus/Plus Query 41 GCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCA 100 || |||| ||| ||| | || | || | ||||||||||||| |||| ||||||||| Sbjct 700 GCGCTTCGCTGCGTGCGTTGGTGTTCCGGAACTTTTACTTTGAGAAAAATAGAGTGTTTC 759 Query 101 AAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||| | | || | |||||| |||||||||||||| ||||||| | |||||| Sbjct 760 AAGCAGGCTTGTCGCCCTGAATACTGCAGCATGGAATAATAAGATAGGACCTT-GGTTCT 818 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 |||||||||||||||||||||| ||||||||||||||||| ||| ||||| | |||| Sbjct 819 ATTTTGTTGGTTTCTAGGACCGAGGTAATGATTAATAGGGACAGTTGGGGGCATTCGTAT 878 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || ||||||||||||||||||| ||||| || ||||| ||||||||||||||| || Sbjct 879 TTAACTGTCAGAGGTGAAATTCTTAGATTTGTTAAAGACGAACTACTGCGAAAGCATTTG 938 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| |||||| || |||||| Sbjct 939 CCAAGGATGTTTTCATTAATCA-AGAACGACAG-TAGGGG 976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915178977856