Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1944 282 8e-74 >seq1944 Length=1893 Score = 282 bits (312), Expect = 8e-74 Identities = 252/314 (80%), Gaps = 9/314 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG----CTTC 75 || |||||||||| |||||||||||| | |||||| | ||| |||| Sbjct 1312 GAACGAGACCTTAGCCTGCTAAATAGGATCGGGAACTTTGG----TTTCCGCATCACTTC 1367 Query 76 TTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||| | || || | | | |||||||||||||||||||||||||||||||| Sbjct 1368 TTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 1427 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 ||||||||||||||||| |||||||||||||||||| | ||||||||| | ||||| Sbjct 1428 CCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTTGACCTT 1487 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 |||||| |||||||||||||||| | | | ||||| |||||||||| |||||||| Sbjct 1488 GGCCGGCAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGCAAT 1547 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 |||| ||||||||||||||||||||||| |||| |||| |||| ||| |||||||| Sbjct 1548 TATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAACAGCTTGCGCCGATTACGT 1607 Query 315 CCCTGCCCTTTGTA 328 |||||||| ||||| Sbjct 1608 CCCTGCCCCTTGTA 1621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947178242816