Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1590 614 2e-173 >seq1590 Length=4531 Score = 614 bits (680), Expect = 2e-173 Identities = 457/530 (86%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| |||||||||||||||| ||| Sbjct 715 CTTTTGGTCAACATGAGATTTCTGTTCTCATTGAGCTTGCCTTAGGACACCTGCGCTATT 774 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||||||||||||||||||||||||||||||| ||||| || | |||| Sbjct 775 GTTTCACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCGCATTGATC 834 Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGT-TCCGCTTCAT 183 || |||||||| |||||| || | || | | ||| | || || || | Sbjct 835 AGCGCGCGAAGGCGCCTTAAGGCAAAAACACATGC----AAGCATGCGTCTCAACTCGAC 890 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| || | ||||||||||||||||| ||||||| |||||||| Sbjct 891 GGAATAAGTAAAACGACACTGAGGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCAC 947 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 948 CTATGCTACACCCCTCAAGTCGTTCCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 1007 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1008 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 1067 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1068 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGATGACGAGGC 1127 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct 1128 ATTTGGCTACCTTAAGAACGTCATAGTTACGTCCGCCGTTAACCCGCGCTTGATTGAATT 1187 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1188 TCATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635162439456