Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2182 141 3e-31 seq485 100 1e-18 >seq2182 Length=5127 Score = 141 bits (156), Expect = 3e-31 Identities = 108/128 (84%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410 ||||||||| || | | |||||||| ||||||||| || |||||||||||||| Sbjct 1047 ATTTCACCGAATCTTTTTCTAAGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGG 1106 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| Sbjct 1107 AACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTAC 1166 Query 471 TGGGGCTT 478 ||| |||| Sbjct 1167 TGGAGCTT 1174 >seq485 Length=6229 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 208 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 267 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 268 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702360895872