Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F000769155.2_202016-09- 22] 2,297 sequences; 44,034,411 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2182 95.1 3e-17 >seq2182 Length=5127 Score = 95.1 bits (104), Expect = 3e-17 Identities = 114/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 79 ATAAAAGAAGTTTACAATCCGTAG-AACCT-TCATCCTTCACGCTACTTGGCTGGTTCAG 136 ||||||||||||||||| | ||| || || || |||| |||| || ||| ||| Sbjct 3923 ATAAAAGAAGTTTACAA-CTGTATTAAGCTGTCTTCCTCCACGTGACGACGCTCTGTCAA 3865 Query 137 ACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTC 196 || || ||||| |||||||| |||||| ||||||||||||||||||||| || | Sbjct 3864 GCTTGCGCTCATTGCAGAATATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGACTGTATT 3805 Query 197 TCAGTTCCAATGTGGGGGACCTTCCTCTCAG 227 ||| |||||||||| || | |||||||| Sbjct 3804 TCAATTCCAATGTGACTGATCCCCCTCTCAG 3774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068775449664