Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq865 149 2e-33 seq863 102 2e-19 >seq865 Length=5557 Score = 149 bits (164), Expect = 2e-33 Identities = 194/265 (73%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||| | ||||||| || ||| ||||||| | ||||||| Sbjct 1098 ATCTTCACAGACATTCCTATTTCACCGAATCTTTTTCTAAGACAGCATCCAAGTCGTTAC 1157 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1158 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 1217 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAA 194 ||||| |||||||||||| || |||| | || | ||| | || || | Sbjct 1218 GTTACAGCCGCCGTTTACTGGAGCTTATAAAAATA-CTT--GGATA-AAAAATATTTTTT 1273 Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 ||||| | || |||| ||||||| |||| ||| ||| | || || || ||| Sbjct 1274 TTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTGATTAAACTTAGCGGAG 1333 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||| |||||||||||| Sbjct 1334 ACCTGTGTTTTTGATAAACAGTCGC 1358 >seq863 Length=6273 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 3268 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 3327 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 3328 CGTCA-GATTACAGCCGCCGTTTACC 3352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260789094080