Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq865 235 2e-59 >seq865 Length=5557 Score = 235 bits (260), Expect = 2e-59 Identities = 277/366 (76%), Gaps = 18/366 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 4413 TACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 4472 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | ||||||||||||||||||| | ||||| || | || | Sbjct 4473 GTGGTTTAATTCGATGTAACGCGAAGAACCTTACCAGAACTTGATAT-ATATG---TTTT 4528 Query 121 TAGAGAT---AGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGT 177 || | || | | ||| || | || | ||||| | ||||||| |||||| Sbjct 4529 TAAAAATTTAATAAATTT----TTATAAGTAC--ATCTACAGGAGGTGCATGGCTGTCGT 4582 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct 4583 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGTAGCCCTTATTTAAAGT 4642 Query 238 T-GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 | | ||| |||| || || | | ||| || | | || ||||||||| Sbjct 4643 TAACTATCTTTAAAAACTGC-CTAT-ATTTGTCT--ATATAAAAATAAGGAGGAAGGAAT 4698 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| ||||||| || |||||||| ||||| | ||||||| ||||||||||||||||| Sbjct 4699 GGAAAACGTCAAGTCCTCATGCCCTTTATGTTCTGGGCTATACACGTGCTACAATGGATG 4758 Query 357 ATACAA 362 ||||| Sbjct 4759 GTACAA 4764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503986990400