Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq865 138 2e-30 >seq865 Length=5557 Score = 138 bits (152), Expect = 2e-30 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| ||||||||||||||| ||||||||||||||| ||||| | Sbjct 3933 TCAAGCTTGCGCTCATTGCAGAATATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGACTG 3874 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| ||||| ||||||||||| |||||||| ||| ||| |||| ||||||| || Sbjct 3873 TATTTCAATTCCAATGTGACTGATCCCCCTCTCAGGGCAGCTACCGATCTTCGCCTTAGT 3814 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | |||| | || |||||||||||| || Sbjct 3813 AAATTATTATTTTACTAACTAGCTAATCAGA 3783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071990727200