Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq561 156 4e-36 >seq561 Length=1818 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 1153 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 1094 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | ||||||||||||| |||||||||||||| ||||| Sbjct 1093 ATGGAATAATAAGATAGGACCTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAG-GTAAT 1036 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 1035 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 976 Query 188 TATT 191 | || Sbjct 975 TGTT 972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511995709600