Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq865 208 2e-51 >seq865 Length=5557 Score = 208 bits (230), Expect = 2e-51 Identities = 250/335 (75%), Gaps = 10/335 (3%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 ||||||||||||||| |||| ||| |||| ||||||| |||| ||||| | ||||| Sbjct 3783 TCTGATTAGCTAGTTAGTAAAATAATAATTTACTAAGGCGAAGATCGGTAGCTGCCCTGA 3842 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 ||||| |||| | |||||||||| ||| | || ||||||||||||||||||||| ||||| Sbjct 3843 GAGGGGGATCAGTCACATTGGAATTGAAATACAGTCCAAACTCCTACGGGAGGCTGCAGT 3902 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 |||||||||| ||||| || |||| ||| ||| || | |||| || || || Sbjct 3903 GGGGAATATTCTGCAATGAGCGCAAGCTTGACAGAGCGTCGTCACGTGGAGGAAGACAGC 3962 Query 344 CT--TCGGGTCGTAAAGCTCTGT--CCTCAAGGAAGATAATGACGGTACTTGA--GGAGG 397 | | || ||||| ||| | |||| | ||| |||| |||| | | Sbjct 3963 TTAATACAGTTGTAAACTTCTTTTATTTCAAAGTGAATATTGAC---ACTTAAATAAATA 4019 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||| |||| |||| |||||||||||||||||||| ||| || | ||||||||||| Sbjct 4020 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 4079 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||||||| |||||||||| || ||||||||||| Sbjct 4080 GAATTACT-GGGCGTAAAGCGTATGTAGGTGGTTT 4113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497587045760