Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq865 141 3e-31 seq863 100 1e-18 >seq865 Length=5557 Score = 141 bits (156), Expect = 3e-31 Identities = 108/128 (84%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410 ||||||||| || | | |||||||| ||||||||| || |||||||||||||| Sbjct 1116 ATTTCACCGAATCTTTTTCTAAGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGG 1175 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| Sbjct 1176 AACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTAC 1235 Query 471 TGGGGCTT 478 ||| |||| Sbjct 1236 TGGAGCTT 1243 >seq863 Length=6273 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 3253 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 3312 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 3313 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 3351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702385274240