Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F001305735.1_202015-10- 02] 865 sequences; 44,563,857 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq712 129 1e-27 seq89 129 1e-27 >seq712 Length=834 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 419 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 476 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 477 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 534 >seq89 Length=80754 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 78101 GTACGAGAGGAACAGTT-AGTTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 78158 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 78159 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCTATGC 78216 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 80337 GTACGAGAGGAACAGTT-AGTTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 80280 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 80279 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCTATGC 80222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193135360