Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq255 143 4e-32 >seq255 Length=656 Score = 143 bits (158), Expect = 4e-32 Identities = 180/244 (74%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||| ||| || ||||| || |||| | || || ||| Sbjct 243 TTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 185 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | || |||||||| |||||||| || | || | |||||| | ||| | ||||| Sbjct 184 GTGCTATGTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGCGGCTGCCAACCGCTCAG 125 Query 122 ----CACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 || ||| ||||| ||| || ||||||||||||||||||| ||||||||| Sbjct 124 GGAGCAAGTCCCATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGC 65 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | | |||||| | || ||||| | | | ||| || || | ||| |||||||||||||||| Sbjct 64 CTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACCTGACCACCTGTGT 5 Query 237 CGGT 240 |||| Sbjct 4 CGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694391315443