Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq255 504 2e-140 >seq255 Length=656 Score = 504 bits (558), Expect = 2e-140 Identities = 368/427 (86%), Gaps = 9/427 (2%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| ||||||||| || |||||||| Sbjct 429 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGT 370 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 369 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA--------TTCGCTACC 318 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 317 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 258 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 257 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTT 198 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | Sbjct 197 TCGTGTTTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGCGGCT 138 Query 301 GGCATGAGCTTACGGAGCAAGT-CCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | || ||| | ||||||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 137 GCCAACCGCTCAGGGAGCAAGTCCCATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTAC 78 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||| || ||||||||||||||||| | |||||||||||||||| ||||| | ||| ||| Sbjct 77 GGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACC 18 Query 420 CAACCAC 426 ||||| Sbjct 17 TGACCAC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260783723072