Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq949 614 2e-173 seq357 116 1e-23 >seq949 Length=3495 Score = 614 bits (680), Expect = 2e-173 Identities = 457/530 (86%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| |||||||||||||||| ||| Sbjct 2814 CTTTTGGTCAACATGAGATTTCTGTTCTCATTGAGCTTGCCTTAGGACACCTGCGCTATT 2755 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||||||||||||||||||||||||||||||| ||||| || | |||| Sbjct 2754 GTTTCACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCGCATTGATC 2695 Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGT-TCCGCTTCAT 183 || |||||||| |||||| || | || | | ||| | || || || | Sbjct 2694 AGCGCGCGAAGGCGCCTTAAGGCAAAAACACATGC----AAGCATGCGTCTCAACTCGAC 2639 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| || | ||||||||||||||||| ||||||| |||||||| Sbjct 2638 GGAATAAGTAAAACGACACTGAGGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCAC 2582 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2581 CTATGCTACACCCCTCAAGTCGTTCCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 2522 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2521 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 2462 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2461 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGATGACGAGGC 2402 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct 2401 ATTTGGCTACCTTAAGAACGTCATAGTTACGTCCGCCGTTAACCCGCGCTTGATTGAATT 2342 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2341 TCATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 2292 >seq357 Length=431 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 317 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 376 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 377 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635178889568