Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq255 248 3e-63 >seq255 Length=656 Score = 248 bits (274), Expect = 3e-63 Identities = 341/474 (72%), Gaps = 22/474 (5%) Strand=Plus/Minus Query 92 GTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACC 151 ||||| ||||||||| | |||||||||| ||||| || |||| ||||||||||| | | Sbjct 656 GTTACGCTTTGGGAGGAGA-CCGCCCCAGTCAAACTGCCTACCATGCACTGTCCCCGATC 598 Query 152 CAGATCATGGGCCAAGGTTAGATATCCACTACGGTC-AGAGTGGTATTTCAACAACGACT 210 ||| | |||| || |||||||| || ||| | || ||||||||||||| | || Sbjct 597 CAGCTAATGGACCTAGGTTAGAACCTCAA-ACGCACCAGGGTGGTATTTCAACGTTGGCT 539 Query 211 CCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGA 270 ||| | |||||| | | ||| || ||||||||||||||||||| | | | | Sbjct 538 CCATGAGATCTAGCGACCTCACTTCAAAGCCTCCCACCTATCCTACACAGATCCGTTCAA 479 Query 271 ATGCCAATACCAAGCTATAGTGAAGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACG 329 | ||||||| |||||| ||| ||||| | ||||||||| |||| | ||||| | | Sbjct 478 AGTCCAATACAAAGCTACAGTAAAGGTTCATGGGGTCTTTCCGTCTTTCCGCGGGGAGAT 419 Query 330 AGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGT 389 ||||| | || | | ||| ||| | | | || || ||||||| || |||| Sbjct 418 TGCATCATCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTGTGGCCATCGT 359 Query 390 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 449 |||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 358 TACGCCATTCGTGCAGGTCGGAACTTACCCGA--------TTCGCTACCTTAGGACCGTT 307 Query 450 ATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTG 509 |||||||| |||||||||||||||||||| || | || || | || | Sbjct 306 ATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC----------G 257 Query 510 CTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 || || | |||||||||||||||||||||||| ||| || ||||| || Sbjct 256 CTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702378022016