Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019455.1_202017-03- 06] 1,291 sequences; 42,346,107 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq737 273 7e-71 >seq737 Length=3209 Score = 273 bits (302), Expect = 7e-71 Identities = 218/259 (84%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 248 ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTAT 307 ||||||| |||| |||| ||||||||||||||| || | ||| | ||||||| | ||| Sbjct 5 ATGCGATCCGTTCGGTTACTATGAATCACCAAGGCTCCACAAAGTGGGTTGGTTCTGTAT 64 Query 308 CTAATAAATACACCCCTTCCGAAGTCGGGGT--TTTTAGCATGTATTAGCTCTAGAATTA 365 |||||||| || ||| ||| ||| || | | | |||||||||||| |||||||| Sbjct 65 CTAATAAACACGGCCCCTCCAAAGAAGGAGGCCTGTGCGCATGTATTAGCCATAGAATTA 124 Query 366 CCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 ||| ||||||||||||| ||| || ||||||||||| ||||||| ||||||||||||| Sbjct 125 CCATGGTTATCCATGTAA-AAGAGACCATCAAATAAACTATAACTGTTTTAATGAGCCAT 183 Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 184 TCGCAGTTTCACCGTACAAAA-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 242 Query 486 AGCATATGACTACTGGCAG 504 ||||||||||||||||||| Sbjct 243 AGCATATGACTACTGGCAG 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510380500736