Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq441 277 3e-72 >seq441 Length=1824 Score = 277 bits (306), Expect = 3e-72 Identities = 203/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 1656 GTACAAGGGGCAGGGACGTAATCGGCGCAAGCT-GTTGACTTGCGCCTACTAGGCATT-C 1599 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 1598 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 1539 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| |||||| |||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 1538 ACCCAGACCTGCCGGCCAAGGTCAAAAACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 1479 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1478 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 1427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751990915605