Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq441 313 4e-83 >seq441 Length=1824 Score = 313 bits (346), Expect = 4e-83 Identities = 226/260 (87%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1511 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 1452 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 1451 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATGC 1392 Query 122 ACCAACCATAGT---CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||||| ||| |||| |||||||||||| |||||||||||||||||||| ||| Sbjct 1391 GGAAACCAAAGTTCCCGATC---CTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAAT 1335 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1334 TAACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 1275 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 1274 GAAAGAGCTATCAATCTGTC 1255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796790374407