Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq362 614 2e-173 >seq362 Length=5155 Score = 614 bits (680), Expect = 2e-173 Identities = 457/530 (86%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| |||||||||||||||| ||| Sbjct 4425 CTTTTGGTCAACATGAGATTTCTGTTCTCATTGAGCTTGCCTTAGGACACCTGCGCTATT 4366 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||||||||||||||||||||||||||||||| ||||| || | |||| Sbjct 4365 GTTTCACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCGCATTGATC 4306 Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGT-TCCGCTTCAT 183 || |||||||| |||||| || | || | | ||| | || || || | Sbjct 4305 AGCGCGCGAAGGCGCCTTAAGGCAAAAACACATGC----AAGCATGCGTCTCAACTCGAC 4250 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| || | ||||||||||||||||| ||||||| |||||||| Sbjct 4249 GGAATAAGTAAAACGACACTGAGGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCAC 4193 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 4192 CTATGCTACACCCCTCAAGTCGTTCCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 4133 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4132 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 4073 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 4072 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGATGACGAGGC 4013 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| Sbjct 4012 ATTTGGCTACCTTAAGAACGTCATAGTTACGTCCGCCGTTAACCCGCGCTTGATTGAATT 3953 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3952 TCATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 3903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635179609056