Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019465.1_202017-03- 06] 1,247 sequences; 43,895,689 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq481 129 1e-27 seq362 129 1e-27 >seq481 Length=49236 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 143 GTACGAGAGGAACAGTT-AGTTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 86 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 85 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCTATGC 28 >seq362 Length=5155 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 4751 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 4808 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 4809 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 4866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819190103808