Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1048 277 3e-72 >seq1048 Length=1610 Score = 277 bits (306), Expect = 3e-72 Identities = 203/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 1555 GTACAAGGGGCAGGGACGTAATCGGCGCAAGCT-GTTGACTTGCGCCTACTAGGCATT-C 1498 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 1497 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 1438 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| |||||| |||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 1437 ACCCAGACCTGCCGGCCAAGGTCAAAAACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 1378 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1377 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 1326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751988387710