Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq619 284 4e-74 >seq619 Length=326 Score = 284 bits (314), Expect = 4e-74 Identities = 256/319 (80%), Gaps = 6/319 (2%) Strand=Plus/Plus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| Sbjct 9 CCTTAGGACACCTGCGCTATTATTTCACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 68 Query 106 ACAATGTCATCAACCCGGATCGGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTG 164 || ||||| || | ||| || | |||||| ||| || || | || | | Sbjct 69 ACTATGTCTTCCGCATTAATCAGCGCACGAAGGCGCCTCAAGGCAAAAACACATGCAAGC 128 Query 165 AAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTT 224 | | | || || | || ||||||||| || | || |||||||||||||| Sbjct 129 ATGCGCC--TCAACTCGACGGAATAAGTAAAACGACACTGAGCGTAGTGGTATTTCAAGA 186 Query 225 GCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG 284 ||||||| |||||||| ||| ||||||| |||||||| || ||| |||||||||||| Sbjct 187 TCGCCGAA---GCTCCCACCTATGCTACACCCCTCAAGTCGTTCCACCAAGTCGGACTAG 243 Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 244 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGTCCGTTCCCTTGGCTG 303 Query 345 TGGTTTCGCTAGATAGTAG 363 ||||||||||||||||||| Sbjct 304 TGGTTTCGCTAGATAGTAG 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635173934912