Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyclospora_20cayetanensis_20[genbank_20GCA_5F002019475.1_202017-03- 06] 1,594 sequences; 41,397,365 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1498 129 1e-27 seq1499 113 7e-23 >seq1498 Length=1125 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 1102 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 1045 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 1044 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 987 >seq1499 Length=2065 Score = 113 bits (124), Expect = 7e-23 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||| |||||| ||||||| |||| || |||||||||||||||||||||| |||||| Sbjct 2047 ATACTTGGTTAATGCGGCTAGCTGAAAAGCTAGTGCCGCGAAGCTACCATCTGTTGGATT 1988 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| ||||||||||||||||||||||| |||| Sbjct 1987 ATGACTGAACGCCTCTAAGTCAGAATCTATGC 1956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819187350016