Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2490 269 5e-70 >seq2490 Length=1873 Score = 269 bits (298), Expect = 5e-70 Identities = 242/296 (82%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 25 TTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAA 84 |||||| | || | ||| ||| | || ||| || || | || | ||||||||||||| Sbjct 1139 TTCTGGT-AGCCTCCTGCGCTTAATTGCGTGGGCTGGTGTTCCGGAACTTTTACTTTGAG 1081 Query 85 AAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAA 142 |||| ||||||||| |||||||| | | || | |||||| |||||||||||||| | Sbjct 1080 AAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGCATGGAATAATAAGA 1021 Query 143 TAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAG 202 |||||| | |||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1020 TAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATGATTAATAGGGACAG 962 Query 203 TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACT 262 | ||||| | ||||| || ||||||||||||||||||| ||||| || ||||| |||| Sbjct 961 TTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTTAAAGACGAACT 902 Query 263 ACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| || |||||||||||||||||||||| |||||| || |||||| Sbjct 901 ACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGACAG-TAGGGG 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915168745920