Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2304 98.7 3e-18 seq208 73.4 1e-10 >seq2304 Length=2498 Score = 98.7 bits (108), Expect = 3e-18 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| ||||||||||||||||| |||||||| |||| Sbjct 1857 TCGTTACACCATTCATGCAGGACGGAATATACCCGACAAGGAATTTTGCTACCTTTGGAC 1916 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 1917 CGTCA-GATTACAGCCGCCGTTTACC 1941 >seq208 Length=58210 Score = 73.4 bits (80), Expect = 1e-10 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 54 AGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 113 ||||||| || || |||| || |||||||||||||||| ||||||||||||||||| Sbjct 37113 AGACAGCATCGAAGTCATTACACCTTTCGTGCAGGTCGGAAAATACCCGACAAGGAATTT 37172 Query 114 CGCTA 118 ||||| Sbjct 37173 CGCTA 37177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260756943680