Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2304 93.3 9e-17 seq208 73.4 8e-11 >seq2304 Length=2498 Score = 93.3 bits (102), Expect = 9e-17 Identities = 74/88 (84%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || ||||| ||||||||||||||||| |||||||| | Sbjct 1854 AAGTCGTTACACCATTCATGCAGGACGGAATATACCCGACAAGGAATTTTGCTACCTTTG 1913 Query 119 GACCGTTATAGTTACGGCCGCCGTTTAC 146 |||||| | | |||| |||||||||||| Sbjct 1914 GACCGTCAGA-TTACAGCCGCCGTTTAC 1940 >seq208 Length=58210 Score = 73.4 bits (80), Expect = 8e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 48 AGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT 107 |||||| | || || |||| |||||||||| |||||||| ||||||||||||||||| Sbjct 37113 AGACAGCATCGAAGTCATTACACCTTTCGTGCAGGTCGGAAAATACCCGACAAGGAATTT 37172 Query 108 CGCTA 112 ||||| Sbjct 37173 CGCTA 37177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062363719040