Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1214 102 2e-19 >seq1214 Length=152077 Score = 102 bits (112), Expect = 2e-19 Identities = 146/204 (72%), Gaps = 10/204 (5%) Strand=Plus/Minus Query 20 CTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAA 79 ||| ||||||||||||||||| |||||| | |||||||||||||||||||||| | || Sbjct 56085 CTCTAAGGAATTGACGGGGACTAGCACAAACTGTGGAGCATGTGGTTTAATTCGGCGTAA 56026 Query 80 CGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCC 139 ||| |||||||| |||| | ||||| || | || | | | | ||| | | Sbjct 56025 CGCCAAGAACCTCACCAGAGCTTGAAAT-ATATG--CTATTAAAAAATAAA-------CT 55976 Query 140 TTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTG 199 || | | ||| ||| | ||| || |||||||| |||||||||| |||||| Sbjct 55975 TTTTGTAAATAGAAAAGCAGCAGGTGCGTGAGTGTCGTCAACTCGTGTCGTCCGATGTTA 55916 Query 200 GGTTAAGTCCCGCAACGAGCGCAA 223 | | |||||| || ||||||| || Sbjct 55915 GCTGAAGTCCAGCGACGAGCGTAA 55892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503948638400