Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2490 313 4e-83 seq2320 102 1e-19 seq631 89.7 8e-16 >seq2490 Length=1873 Score = 313 bits (346), Expect = 4e-83 Identities = 219/246 (89%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 420 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG 132 | || | |||| |||| |||| ||||||||||||||| |||| || | | | Sbjct 421 TTC--CTGACTTTGGTTGGATACCAACAGTCCCTCTAAGAAGTTTACCACGAATCGAGAT 478 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 ||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 479 TCGC-GTAACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATC 537 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 538 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAA 597 Query 253 TCTGTC 258 |||||| Sbjct 598 TCTGTC 603 >seq2320 Length=2272 Score = 102 bits (112), Expect = 1e-19 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || || | ||||||||||| |||||| ||||||||||||| |||| |||| ||| Sbjct 829 CTCGTTGCCTGCATCAGTGTAGCGAGCGTGCAGCCCAGAACATCTCCGGGCTTCACCGAC 888 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 |||||||||||||| || ||| | | | || || | || |||||| ||||| | || Sbjct 889 CTGTTATTGCCTCAGACGTCCTTGCGTTCGACGCGCAAAGCCCCTCTGAGAAGTGATGCA 948 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 |||| ||| | || |||| ||| |||||| | ||| ||||| Sbjct 949 GTAACCGAAGTTACCGACCCTCCTTAGAAGGCCAAGGTCGCATTCCTTATC 999 >seq631 Length=28019 Score = 89.7 bits (98), Expect = 8e-16 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10311 CTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGAC 10252 Query 63 CTGT 66 |||| Sbjct 10251 CTGT 10248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796773639615