Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05]
3,415 sequences; 45,830,609 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq70 102 1e-19
seq3388 98.7 2e-18
seq695 91.5 2e-16
>seq70
Length=10434
Score = 102 bits (112), Expect = 1e-19
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219
|||| ||||||| || | |||| |||||||| ||| |||| |||||| | || |||||
Sbjct 5416 GATATGGACCGAGCTATTCCGCGGCGTTCTGATCCCGGCTCACGTGCCGCATTTTTGGGC 5475
Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273
|||||| |||| |||| |||||||| ||| ||||||| |||||||||| ||
Sbjct 5476 GAACAGGCCAAGCCTTCCCACCTACTTTAGCTTCAGGATGCGACGAGCCGAGAT 5529
>seq3388
Length=12968
Score = 98.7 bits (108), Expect = 2e-18
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219
|||| ||||||| || | |||| ||||||| ||| |||| |||| | ||||| |||||
Sbjct 7702 GATATGGACCGAGCTATTCCGCGGTGTTCTGATCCCGGCTCACGTGGCGCTTTATTGGGC 7761
Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273
|||||| |||| |||| |||||||| |||| || ||| |||||||||| ||
Sbjct 7762 GAACAGGCCAAGCCTTCCCACCTACTTTAGCCTCACGATTCGACGAGCCGATAT 7815
>seq695
Length=97032
Score = 91.5 bits (100), Expect = 2e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 179 CGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGG 238
|||| |||||||| ||| |||| |||| | ||||| ||||||||||| |||| ||||
Sbjct 95712 CGCGGCGTTCTGATCCCGGCTCACGTGACGCTTTATTGGGCGAACAGGCCAAGCCTTCCC 95653
Query 239 ACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273
|||||||| ||| ||||||| || ||||||| ||
Sbjct 95652 ACCTACTTTAGCTTCAGGATGCGAAGAGCCGAGAT 95618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780774168940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |