Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq70 102 1e-19 seq3388 98.7 2e-18 seq695 91.5 2e-16 >seq70 Length=10434 Score = 102 bits (112), Expect = 1e-19 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||| || | |||| |||||||| ||| |||| |||||| | || ||||| Sbjct 5416 GATATGGACCGAGCTATTCCGCGGCGTTCTGATCCCGGCTCACGTGCCGCATTTTTGGGC 5475 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 |||||| |||| |||| |||||||| ||| ||||||| |||||||||| || Sbjct 5476 GAACAGGCCAAGCCTTCCCACCTACTTTAGCTTCAGGATGCGACGAGCCGAGAT 5529 >seq3388 Length=12968 Score = 98.7 bits (108), Expect = 2e-18 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||| || | |||| ||||||| ||| |||| |||| | ||||| ||||| Sbjct 7702 GATATGGACCGAGCTATTCCGCGGTGTTCTGATCCCGGCTCACGTGGCGCTTTATTGGGC 7761 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 |||||| |||| |||| |||||||| |||| || ||| |||||||||| || Sbjct 7762 GAACAGGCCAAGCCTTCCCACCTACTTTAGCCTCACGATTCGACGAGCCGATAT 7815 >seq695 Length=97032 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 179 CGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGG 238 |||| |||||||| ||| |||| |||| | ||||| ||||||||||| |||| |||| Sbjct 95712 CGCGGCGTTCTGATCCCGGCTCACGTGACGCTTTATTGGGCGAACAGGCCAAGCCTTCCC 95653 Query 239 ACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 |||||||| ||| ||||||| || ||||||| || Sbjct 95652 ACCTACTTTAGCTTCAGGATGCGAAGAGCCGAGAT 95618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780774168940