Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2490 277 3e-72 seq2320 118 2e-24 seq631 89.7 1e-15 >seq2490 Length=1873 Score = 277 bits (306), Expect = 3e-72 Identities = 250/310 (81%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | || | | || | |||||||| Sbjct 512 GAACGAGACCTTAACCTGCTAAATAGTTACGCGAATCTCGATTCGTGGTAAACTTCTTAG 453 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| | || || | || | | || ||||||||||||||||||||||||||| Sbjct 452 AGGGACTGTTGGTATCCAACCAAAGTCAGGA--AGGCAATAACAGGTCTGTGATGCCCTT 395 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| | || |||| || |||| || Sbjct 394 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGATGTCAGAGAGTG--TCTCCTTCACC 337 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||| |||||| ||||||||||||||||| |||||||||| || Sbjct 336 GAGAGGTGTGGGTAATCTT-TTAAACATCGTCGTGCTGGGGATAGATCATTGCAATTTTT 278 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 | |||| |||||||||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct 277 GATCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTACGTCCCT 218 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 217 GCCCTTTGTA 208 >seq2320 Length=2272 Score = 118 bits (130), Expect = 2e-24 Identities = 132/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||| |||||| || | || || | | | ||| || ||||||||||||||||| ||| Sbjct 941 CTTCTCAGAGGGGCTTTGCGCGTCGAACGCAAGGACGTCTGAGGCAATAACAGGTCGGTG 882 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 | |||| ||||||||||||| |||||| ||||||||||| || ||||||| || | | Sbjct 881 AAGCCCGGAGATGTTCTGGGCTGCACGCTCGCTACACTGATGCAGGCAACGAGCTC-TTA 823 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 ||||| | | || || ||||||||||| | | | ||||| | ||| |||| Sbjct 822 CCTTGACAGACGGGGCTTGGTAATCTTGTGAGAGTGCATCGTGGTAGGGGTAGA 769 >seq631 Length=28019 Score = 89.7 bits (98), Expect = 1e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 120 ACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAA 179 |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| Sbjct 10248 ACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAA 10307 Query 180 CGAG 183 |||| Sbjct 10308 CGAG 10311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947167653120