Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2304 96.9 1e-17 seq208 82.4 3e-13 >seq2304 Length=2498 Score = 96.9 bits (106), Expect = 1e-17 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| |||||||||||||||| Sbjct 1842 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATATACCCGACAAGGAATT 1901 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 1902 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 1940 >seq208 Length=58210 Score = 82.4 bits (90), Expect = 3e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| | |||| |||| || |||||||||||||||| ||||||||||||||||| Sbjct 37113 AGACAGCATCGAAGTCATTACACCTTTCGTGCAGGTCGGAAAATACCCGACAAGGAATTT 37172 Query 432 CGCTA 436 ||||| Sbjct 37173 CGCTA 37177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702341863040