Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq535 89.7 8e-16 >seq535 Length=221240 Score = 89.7 bits (98), Expect = 8e-16 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || || | || || ||| ||||||| |||| || ||| Sbjct 176107 GTACGAGAGGAACAGTTGACTTAGG--TACTTCGTTAATGCGGCTAGCTGAGAAGCTAGT 176050 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 ||||||| || |||| || ||||||||| ||||||| ||||||||||||||| Sbjct 176049 GCCGCGACTCTGCCATATGTTGGATTATGACTGAACGTCTCTAAGTCAGAATC 175997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819172898560