Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05] 3,415 sequences; 45,830,609 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2490 526 7e-147 >seq2490 Length=1873 Score = 526 bits (582), Expect = 7e-147 Identities = 428/508 (84%), Gaps = 11/508 (2%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 ||||||||||||||| | |||| ||||||||| ||||| | ||||||||||| Sbjct 1323 TCATTCCAATTACAAAGCATAAAAT-GCCCTGTATTGTTATTTCTCGTCACTACCTCGAA 1381 Query 65 G-TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 123 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1382 ACTGTTTTCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCT 1441 Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183 |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| Sbjct 1442 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCACTGCCACGGTAGGC 1501 Query 184 CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-A 242 || || |||||| ||||||| ||||||| |||||| |||||||| ||||||| ||| | | Sbjct 1502 CAATACCCTACCGTCGAAAGCTGATAGGTCAGAAACTTGAATGATCCATCGCGGGCCCGA 1561 Query 243 AGGCCA--TGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC-CCGAAGG-GCGTTG 298 | |||| |||||| |||| |||| |||||||||||||| || | |||| | |||| Sbjct 1562 AAGCCAACTGCGATCCGTTCGGTTACTATGAATCACCAAGACTCCACACAAGGTGGGTTG 1621 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGAAGTCG--GGGTTTTTAGCATGTATTAGCT 356 ||||| ||||||||||| ||| ||| ||| || | || || |||||||||||| Sbjct 1622 GTTTTGTATCTAATAAACACAGCCCCTCCAGAGGAGGAGGCCCTTGCGCATGTATTAGCC 1681 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||||||||||| ||| || ||||||||||| ||||||| |||| Sbjct 1682 ATAGAATTACCATGGTTATCCATGTA-AAAGAGACCATCAAATAAACTATAACTGTTTTA 1740 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 1741 ATGAGCCATTCGCAGTTTCACCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATC 1799 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1800 TTTGAGACAAGCATATGACTACTGGCAG 1827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510348419840