Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20acervulina_20[genbank_20GCA_5F000499425.1_202013-11-05]
3,415 sequences; 45,830,609 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq669 102 6e-17
seq200 96.9 3e-15
>seq669
Length=99412
Score = 102 bits (112), Expect = 6e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 61778 TAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC 61837
||||||||||||| ||||| ||||| || || |||||| | ||||| | ||
Sbjct 67894 TAATGTCGCAGTACATTGAGTTTGTAGCGGATCGTCTGCTAACATGCTTGGGGGGGCAGA 67835
Query 61838 GGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGA 61897
||| | |||| ||| ||||| ||||| |||||||| |||||||| || | ||||| |
Sbjct 67834 AGATATTTAATGCGAGGAACCCGTTTGACTTCATGGATATGATTTCTTTGCAAGGCAAAA 67775
Query 61898 CGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
| || || || || ||||||||||| || |||||
Sbjct 67774 CAAACTTCTTTGAAAAACGTGTAGGAGATTATCA 67741
>seq200
Length=58787
Score = 96.9 bits (106), Expect = 3e-15
Identities = 123/168 (73%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054
|||| ||||| | | | ||| || || ||||| ||||||| || ||||| |||||
Sbjct 56825 AAACGTGGGA-GAGATACAGACGCAAGATTGCATACAGCTACTTCTTCAGGGCTTGTATA 56767
Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114
| |||| ||| ||| ||||| || | |||| || || | || ||| ||||| ||
Sbjct 56766 TTGAACAACTTCACAGCAAAGATTGCTTGATCGTAGAGTTCCTAGATGCTGATGATTGCT 56707
Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162
||| | |||||||||||| || |||| ||| ||||| || ||||||||
Sbjct 56706 CTTTCTATTGCATGCATCTTTATACAACATATACGGTGTCCCGGTCTC 56659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397551453095600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |