Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2897 91.5 4e-16 seq493 77.0 8e-12 >seq2897 Length=29064 Score = 91.5 bits (100), Expect = 4e-16 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| | Sbjct 27792 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCA 27851 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||||||||||||||||| | ||| |||| Sbjct 27852 AAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 27884 >seq493 Length=11842 Score = 77.0 bits (84), Expect = 8e-12 Identities = 62/75 (83%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 33 TGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAG 92 |||||||||||||||||| ||| || | ||||||||| | ||||||||||||||||| Sbjct 4831 TGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCAAAATTACTGGGCGTAAAG 4772 Query 93 CGTGCGCAGGCGGTT 107 ||| | ||| |||| Sbjct 4771 CGTATGTAGGTGGTT 4757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289489416800