Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq7937 123 3e-26 >seq7937 Length=213 Score = 123 bits (136), Expect = 3e-26 Identities = 130/167 (78%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||||| || || | ||||||| | ||| ||| || || || Sbjct 46 CGCAAACCGACACAGGTAGTCGAGTGGAGAACACTAAGGTGAGCGAGAGAACTCTCG-TT 104 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA-AATGG 139 |||||||| |||||| |||||| |||||||||| | || |||| | || ||| | ||| Sbjct 105 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGAAGAAGGGGTGCTAGCCAAGAGATTGG 164 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | ||||| ||||||| ||| |||||||||| |||||||||||| Sbjct 165 TTAGCCGCAGTGAATAGGCCCAAACAACTGTTTATCAAAAACACAGG 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531155873050