Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq7700 105 1e-20 seq2897 73.4 8e-11 seq1827 73.4 8e-11 >seq7700 Length=220 Score = 105 bits (116), Expect = 1e-20 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | | |||| ||||| ||||||||||| |||||| ||| ||||||||||| Sbjct 101 GGGACAGTGCCTGGCGGGTAGTTTAACTGGGGCGGTTGCCTCCTAAAATGTAACGGAGGC 160 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228 |||||||| | |||||| | |||| || || || | | |||| ||| ||| ||||| Sbjct 161 GCCCAAAGGTTCCCTCAACCTGGACGGCAATCAGGTGGCGAGTGTAAATGCACAAGGG 218 >seq2897 Length=29064 Score = 73.4 bits (80), Expect = 8e-11 Identities = 69/88 (78%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 252 TCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGC 311 || |||| |||| |||||||| |||||||||||| || || | ||||| ||| |||| Sbjct 24764 TCGAGCAAGGACAAAAGTCGGTCTTAATGATCCGATAGTTCTTAGTGGAAAGGCTATCGC 24705 Query 312 TCGACGGATAAAAGCTACCCTGGGGATA 339 | ||| ||||||| ||| || |||||| Sbjct 24704 TTAACGAATAAAAGTTACTCTAGGGATA 24677 >seq1827 Length=45771 Score = 73.4 bits (80), Expect = 8e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 255 AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCG 314 |||| |||| |||||| | ||||||||||||| || || | ||||| ||| |||||| Sbjct 41430 AGCAAGGACAAAAGTCCGTGTTAATGATCCGGCAGTTCTTAGTGGAAAGGCTGTCGCTTA 41371 Query 315 ACGGATAAAAGCTACCCTGGGGATA 339 || ||||||| ||| || |||||| Sbjct 41370 GCGAATAAAAGTTACTCTAGGGATA 41346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982315759200