Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2897 96.9 4e-18 seq3530 84.2 2e-14 >seq2897 Length=29064 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 25135 TACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTT 25194 Query 173 A 173 | Sbjct 25195 A 25195 >seq3530 Length=6259 Score = 84.2 bits (92), Expect = 2e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||| |||||| ||||| |||||||||||||||||| |||||||| ||||||| Sbjct 1740 TACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGACCGT 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547154543925