Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2897 105 1e-20 >seq2897 Length=29064 Score = 105 bits (116), Expect = 1e-20 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| || ||||| |||||| ||||||||||||||| ||| | | Sbjct 27702 TCAAGCTTGCGCTCATTGCAGAAGATTCCTCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 27643 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| ||| || |||||||| ||| ||| |||| ||||||| | Sbjct 27642 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAAT 27583 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 || |||| || | || ||||||||| || Sbjct 27582 AAGTTATTATCTTATTAATTAGCTAATCAGA 27552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071908076000