Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1586 102 1e-19 seq285 93.3 5e-17 seq419 89.7 6e-16 >seq1586 Length=3397 Score = 102 bits (112), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 |||||||||||||||| || || | ||||||| |||||||||||||| |||||| Sbjct 1359 CTAGAAACCAACAAAAAAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 1417 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 1418 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 1464 >seq285 Length=14561 Score = 93.3 bits (102), Expect = 5e-17 Identities = 86/107 (80%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 |||||||||||||||| || || | ||||||| |||||||||||||| |||||| Sbjct 14554 CTAGAAACCAACAAAAAAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 14496 Query 65 -GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || | |||||||||| ||||||||| |||||| || |||||||| Sbjct 14495 GGGCCACAAGCCTGCTTGAAACACTCTATTTTTCTTAAAGTAAAAGT 14449 >seq419 Length=70660 Score = 89.7 bits (98), Expect = 6e-16 Identities = 87/109 (80%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 |||||||||||||| ||| || | ||||||| |||||||||||||| |||||| Sbjct 28133 CTAGAAACCAACAATATA---ACCGAGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 28077 Query 65 GGGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 |||| |||||||||| || || ||| ||||||||| |||||||||| Sbjct 28076 GGGCAACAAGCCTGCTTGAAAAACCCTATTTTTCTCAAAGTAAAAGTCC 28028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595150556550