Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq2897 105 2e-20 seq3608 80.6 7e-13 >seq2897 Length=29064 Score = 105 bits (116), Expect = 2e-20 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| || ||||| |||||| ||||||||||||||| ||| | | Sbjct 27702 TCAAGCTTGCGCTCATTGCAGAAGATTCCTCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 27643 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 | | ||| | ||| ||||||||||| |||||||| |||||| |||| |||||| Sbjct 27642 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCT 27587 >seq3608 Length=5090 Score = 80.6 bits (88), Expect = 7e-13 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 54 TTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC 113 |||||| ||||| || |||| |||||| ||||||||||||||| ||| | || || Sbjct 2716 TTGCGCTCATTGCAGAAGTTTCCTCACTGCAGCCTCCCGTAGGAGTTTGGGCTGTACTTC 2657 Query 114 AGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 | ||||| ||||||||||| ||| |||| |||||| Sbjct 2656 AATTCCATTGTGGCTGGTCCCCCTGTCAGGGCAGCTA 2620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222295179200