Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq6327 134 3e-29 >seq6327 Length=302 Score = 134 bits (148), Expect = 3e-29 Identities = 177/241 (73%), Gaps = 11/241 (5%) Strand=Plus/Minus Query 7 CATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGC 66 || ||||||||||||||| | || ||||||||||||| | || ||||||| || | Sbjct 301 CAAGGTGGATGCCTTGGCATCGAGAGCCGATGAAGGACGTGGGAGGCTGCGATATGCCTC 242 Query 67 GGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCC--TT 124 |||||| ||| | | | |||||| ||||||||||||||||||||| || | | Sbjct 241 GGGGAGCTGTCAACCGAGCGTGGATCCGAGGATTTCCGAATGGGGAAACCCAGCACGAGT 182 Query 125 TGGGTCAT------TGCATGCTGAATACATAGGTATGC-AAAGCGAACGCGGCGAACTGA 177 ||| | |||| ||||||| ||||| ||| || |||||||| ||| ||| Sbjct 181 GATGTCGTGCTACCCGCAT-CTGAATATATAGG-GTGCGGGAGGGAACGCGGGGAAGTGA 124 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 ||||||| |||| | | |||| ||||| ||| | |||||| |||||||||||||||| Sbjct 123 AACATCTCAGTACCCGTAGGAGGAGAAAACAATTGTGATTCCGCAAGTAGTGGCGAGCGA 64 Query 238 A 238 | Sbjct 63 A 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918321247200