Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20brunetti_20[genbank_20GCA_5F000499725.1_202013-11-07] 8,575 sequences; 66,890,165 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3028 116 6e-24 seq1 104 4e-20 seq2827 102 1e-19 seq419 102 1e-19 seq3021 91.5 2e-16 >seq3028 Length=25216 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || || ||| |||||| |||| || ||| Sbjct 20513 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTAGTTAATGCGGCAAGCTGAAAGGGTAGT 20456 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 20455 GCCGCGACGCTACCATTTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 20398 >seq1 Length=242787 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||| || | | |||||| || |||||| ||||||| |||| || | | Sbjct 51568 GTACGAGAGGGACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAAT 51625 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||| Sbjct 51626 GCCGCGACGCTACCATCTGTTGGATTATGACTGAGCGCCTCTAAGTCAGAATCC 51679 >seq2827 Length=32467 Score = 102 bits (112), Expect = 1e-19 Identities = 87/105 (83%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 31655 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 31712 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 ||||||| ||||||||||| ||||||||| ||||||||||||||| Sbjct 31713 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAG 31757 >seq419 Length=70660 Score = 102 bits (112), Expect = 1e-19 Identities = 82/98 (84%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| || |||||| || |||| ||| || |||||||||| ||||| |||||| Sbjct 36119 TTCAGA-TACTTGGTTAATGGGGCTAGCTGGAAAGTTAGTGCCGCGACGCTACAATCTGC 36177 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||| |||||||||||||||||||||||||||| Sbjct 36178 TGAATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 36215 >seq3021 Length=96511 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | | |||| || |||||| ||||||| |||| || ||| Sbjct 75581 GTACGAGAGGAACAGTTGG-TGCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 75524 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCC 99 ||||||| ||||||||||| ||||||||||||||||||| Sbjct 75523 GCCGCGACGCTACCATCTGTTGGATTATGGCTGAACGCC 75485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819131948800