Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2471 264 2e-68 seq2638 174 2e-41 seq3430 86.0 9e-15 >seq2471 Length=2597 Score = 264 bits (292), Expect = 2e-68 Identities = 192/219 (88%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 2428 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2371 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| ||| ||||||||||||||||||||| ||||| || ||| |||||||| Sbjct 2370 CTCGTTTAAGATCAAAAATTGCAATGATCTATCCCCAGCACGACGATGTTTAAAAGATTA 2311 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| |||| |||| |||| || | ||| ||| | |||||||||||||||||||| Sbjct 2310 CCCACACCTCTCGGTGAAGGAGACACTCTC--TGACATCGTCAGTGTAGCGCGCGTGCGG 2253 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||||||||||||||||||||||||||||||||||||| Sbjct 2252 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 2214 >seq2638 Length=1522 Score = 174 bits (192), Expect = 2e-41 Identities = 151/182 (83%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| |||||||||||| || ||| |||| ||||| |||| ||||||| ||| | Sbjct 179 GTACAAGAGGCAGGGACGTAATCGGCGCACGCTTC-TGACTTGCGCCTACTAGGCATT-C 122 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||||| |||||||||||| ||||||||||||||||||| | || |||||| Sbjct 121 CTCGTTGAAGACTAACAATTGCAATAATCTATCCCCATCACGATGCACCCCCACAAGATT 62 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | || |||| |||||||| | |||||||| || |||||||||||||||||||| Sbjct 61 ACCCAGCCCCATCGGACAAGGTGA-AAACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 3 Query 180 GC 181 || Sbjct 2 GC 1 >seq3430 Length=16798 Score = 86.0 bits (94), Expect = 9e-15 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 12585 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCAAACTTCCTTG 12534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751974036260